Index

Symbols

**type:** Real, required, default = 0.05 Kynema-SGF input parameter **type:** Real, required, default = 0.8 Kynema-SGF input parameter

**type:** Real, required, default = 4 Kynema-SGF input parameter

A

ABL.aerodynamic_roughness_length Kynema-SGF input parameter ABL.anelastic Kynema-SGF input parameter ABL.bndry_file Kynema-SGF input parameter ABL.bndry_io_mode Kynema-SGF input parameter ABL.bndry_output_format Kynema-SGF input parameter ABL.bndry_output_start_time Kynema-SGF input parameter ABL.bndry_planes Kynema-SGF input parameter ABL.bndry_var_names Kynema-SGF input parameter ABL.bottom_reference_pressure Kynema-SGF input parameter ABL.cutoff_height Kynema-SGF input parameter ABL.deltaU Kynema-SGF input parameter ABL.deltaV Kynema-SGF input parameter ABL.initial_condition_input_file Kynema-SGF input parameter ABL.initial_wind_profile Kynema-SGF input parameter ABL.kappa Kynema-SGF input parameter ABL.log_law_height Kynema-SGF input parameter ABL.meso_sponge_start Kynema-SGF input parameter ABL.mesoscale_forcing Kynema-SGF input parameter ABL.minimum_vertical_position Kynema-SGF input parameter ABL.monin_obukhov_length Kynema-SGF input parameter ABL.normal_direction Kynema-SGF input parameter ABL.pertub_ref_height Kynema-SGF input parameter ABL.perturb_temperature Kynema-SGF input parameter ABL.perturb_velocity Kynema-SGF input parameter ABL.random_gauss_mean Kynema-SGF input parameter ABL.random_gauss_var Kynema-SGF input parameter ABL.rans_1dprofile_file Kynema-SGF input parameter ABL.surface_roughness_z0 Kynema-SGF input parameter ABL.surface_temp_flux Kynema-SGF input parameter ABL.surface_temp_init Kynema-SGF input parameter ABL.surface_temp_rate Kynema-SGF input parameter ABL.surface_temp_rate_tstart Kynema-SGF input parameter ABL.surface_temp_timetable Kynema-SGF input parameter ABL.temp_sponge_start Kynema-SGF input parameter ABL.temperature_heights Kynema-SGF input parameter ABL.temperature_values Kynema-SGF input parameter ABL.tendency_forcing Kynema-SGF input parameter ABL.terrain_aligned_profile Kynema-SGF input parameter ABL.thermal_roughness_length Kynema-SGF input parameter ABL.theta_amplitude Kynema-SGF input parameter ABL.Uperiods Kynema-SGF input parameter ABL.velocity_sponge_start Kynema-SGF input parameter ABL.Vperiods Kynema-SGF input parameter ABL.wall_het_model Kynema-SGF input parameter ABL.wall_shear_stress_type Kynema-SGF input parameter ABLForcing.abl_forcing_band Kynema-SGF input parameter ABLForcing.abl_forcing_height Kynema-SGF input parameter ABLForcing.abl_forcing_off_height Kynema-SGF input parameter ABLForcing.abl_forcing_ramp_height Kynema-SGF input parameter ABLForcing.forcing_timetable_frequency Kynema-SGF input parameter ABLForcing.forcing_timetable_output_file Kynema-SGF input parameter ABLForcing.forcing_timetable_start_time Kynema-SGF input parameter ABLForcing.velocity_timetable Kynema-SGF input parameter ABLMesoForcing*.constant_transition_height Kynema-SGF input parameter ABLMesoForcing*.control_gain Kynema-SGF input parameter ABLMesoForcing*.forcing_scheme Kynema-SGF input parameter ABLMesoForcing*.forcing_transition Kynema-SGF input parameter ABLMesoForcing*.normalize_by_zmax Kynema-SGF input parameter ABLMesoForcing*.transition_thickness Kynema-SGF input parameter ABLMesoForcing*.weighting_heights Kynema-SGF input parameter ABLMesoForcing*.weighting_values Kynema-SGF input parameter Actuator.F1.end Kynema-SGF input parameter Actuator.F1.output_frequency Kynema-SGF input parameter Actuator.F1.start Kynema-SGF input parameter Actuator.FixedWingLine.active_force_dirs Kynema-SGF input parameter Actuator.FixedWingLine.airfoil_table Kynema-SGF input parameter Actuator.FixedWingLine.airfoil_type Kynema-SGF input parameter Actuator.FixedWingLine.chord Kynema-SGF input parameter

Actuator.FixedWingLine.disable_spanwise_gaussian Kynema-SGF input parameter Actuator.FixedWingLine.epsilon Kynema-SGF input parameter Actuator.FixedWingLine.epsilon_chord Kynema-SGF input parameter Actuator.FixedWingLine.fllc Kynema-SGF input parameter Actuator.FixedWingLine.fllc_epsilon_dr_ratio Kynema-SGF input parameter Actuator.FixedWingLine.fllc_nonuniform Kynema-SGF input parameter Actuator.FixedWingLine.fllc_relaxation_factor Kynema-SGF input parameter Actuator.FixedWingLine.fllc_start_time Kynema-SGF input parameter Actuator.FixedWingLine.fllc_type Kynema-SGF input parameter Actuator.FixedWingLine.motion_type Kynema-SGF input parameter Actuator.FixedWingLine.normalize_spanwise Kynema-SGF input parameter Actuator.FixedWingLine.num_points Kynema-SGF input parameter Actuator.FixedWingLine.pitch Kynema-SGF input parameter Actuator.FixedWingLine.pitch_timetable Kynema-SGF input parameter Actuator.FixedWingLine.prescribed_uinf Kynema-SGF input parameter Actuator.FixedWingLine.sine_period Kynema-SGF input parameter Actuator.FixedWingLine.sine_vector Kynema-SGF input parameter Actuator.FixedWingLine.span_locs Kynema-SGF input parameter Actuator.FixedWingLine.velocity Kynema-SGF input parameter Actuator.labels Kynema-SGF input parameter Actuator.TurbineFastLine.density Kynema-SGF input parameter Actuator.TurbineFastLine.epsilon Kynema-SGF input parameter Actuator.TurbineFastLine.epsilon_chord Kynema-SGF input parameter Actuator.TurbineFastLine.fllc Kynema-SGF input parameter Actuator.TurbineFastLine.fllc_relaxation_factor Kynema-SGF input parameter Actuator.TurbineFastLine.fllc_type Kynema-SGF input parameter Actuator.TurbineFastLine.hub_height Kynema-SGF input parameter Actuator.TurbineFastLine.nacelle_area Kynema-SGF input parameter Actuator.TurbineFastLine.nacelle_drag_coeff Kynema-SGF input parameter Actuator.TurbineFastLine.num_points_blade Kynema-SGF input parameter Actuator.TurbineFastLine.num_points_tower Kynema-SGF input parameter Actuator.TurbineFastLine.openfast_start_time Kynema-SGF input parameter Actuator.TurbineFastLine.openfast_stop_time Kynema-SGF input parameter Actuator.TurbineFastLine.output_frequency Kynema-SGF input parameter Actuator.TurbineFastLine.rotor_diameter Kynema-SGF input parameter Actuator.TurbineKynemaLine.controller_shared_library_path Kynema-SGF input parameter Actuator.TurbineKynemaLine.dt Kynema-SGF input parameter Actuator.TurbineKynemaLine.generator_efficiency Kynema-SGF input parameter Actuator.TurbineKynemaLine.generator_power_init Kynema-SGF input parameter Actuator.TurbineKynemaLine.hub_wind_vector_init Kynema-SGF input parameter Actuator.TurbineKynemaLine.kynema_input_file Kynema-SGF input parameter Actuator.TurbineKynemaLine.num_points_blade Kynema-SGF input parameter Actuator.TurbineKynemaLine.num_points_tower Kynema-SGF input parameter Actuator.TurbineKynemaLine.num_struct_nodes_blade Kynema-SGF input parameter Actuator.TurbineKynemaLine.num_struct_nodes_tower Kynema-SGF input parameter Actuator.TurbineKynemaLine.output_frequency Kynema-SGF input parameter Actuator.TurbineKynemaLine.rot_speed_radps Kynema-SGF input parameter Actuator.TurbineKynemaLine.rot_speed_rpm Kynema-SGF input parameter Actuator.TurbineKynemaLine.yaw_deg Kynema-SGF input parameter Actuator.TurbineKynemaLine.yaw_rad Kynema-SGF input parameter Actuator.type Kynema-SGF input parameter Actuator.WTG01.awc_amplitude Kynema-SGF input parameter Actuator.WTG01.awc_angular_frequency Kynema-SGF input parameter Actuator.WTG01.awc_azimuthal_mode Kynema-SGF input parameter Actuator.WTG01.awc_clocking_angle Kynema-SGF input parameter Actuator.WTG01.openfast_input_file Kynema-SGF input parameter ActuatorSourceTagging.actuator_source_threshold Kynema-SGF input parameter amr.blocking_factor Kynema-SGF input parameter amr.max_grid_size Kynema-SGF input parameter amr.max_level Kynema-SGF input parameter amr.n_cell Kynema-SGF input parameter amrex_particle.py Kynema-SGF input parameter amrex_plotfile.py Kynema-SGF input parameter amrex_utils.py Kynema-SGF input parameter averaging.averaging_start_time Kynema-SGF input parameter averaging.averaging_stop_time Kynema-SGF input parameter averaging.averaging_time_interval Kynema-SGF input parameter averaging.averaging_window Kynema-SGF input parameter

B

BodyForce.angular_frequency Kynema-SGF input parameter BodyForce.bodyforce_file Kynema-SGF input parameter BodyForce.magnitude Kynema-SGF input parameter

BodyForce.type Kynema-SGF input parameter BodyForce.uniform_timetable_file Kynema-SGF input parameter

C

calc_inflowoutflow_stats.py Kynema-SGF input parameter CheckpointToCSV Kynema-SGF input parameter CMake configuration CMAKE_BUILD_TYPE CMAKE_C_COMPILER CMAKE_C_FLAGS CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS CMAKE_Fortran_COMPILER CMAKE_Fortran_FLAGS CMAKE_INSTALL_PREFIX KYNEMA_SGF_ENABLE_CUDA KYNEMA_SGF_ENABLE_DOCUMENTATION KYNEMA_SGF_ENABLE_MASA KYNEMA_SGF_ENABLE_MPI KYNEMA_SGF_ENABLE_NETCDF KYNEMA_SGF_ENABLE_OPENFAST KYNEMA_SGF_ENABLE_OPENMP KYNEMA_SGF_ENABLE_ROCM KYNEMA_SGF_ENABLE_SYCL KYNEMA_SGF_ENABLE_TESTS KYNEMA_SGF_OPENFAST_VERSION KYNEMA_SGF_REFERENCE_GOLDS_DIRECTORY KYNEMA_SGF_SAVE_GOLDS KYNEMA_SGF_SAVED_GOLDS_DIRECTORY KYNEMA_SGF_TEST_WITH_FCOMPARE KYNEMA_SGF_TEST_WITH_PYTHON CMAKE_BUILD_TYPE CMake configuration

CMAKE_C_COMPILER CMake configuration CMAKE_C_FLAGS CMake configuration CMAKE_CXX_COMPILER CMake configuration CMAKE_CXX_FLAGS CMake configuration CMAKE_Fortran_COMPILER CMake configuration CMAKE_Fortran_FLAGS CMake configuration CMAKE_INSTALL_PREFIX CMake configuration coarsen-chkpt Kynema-SGF input parameter compareMultilevelToReference Kynema-SGF input parameter convert_amrex_hdf5_plotfile.py Kynema-SGF input parameter convert_native_sample_to_time_series.py Kynema-SGF input parameter convert_native_sampling_to_structured_ascii.py Kynema-SGF input parameter CoriolisForcing.east_vector Kynema-SGF input parameter CoriolisForcing.latitude Kynema-SGF input parameter CoriolisForcing.north_vector Kynema-SGF input parameter CoriolisForcing.rotational_time_period Kynema-SGF input parameter

D

diffusion.bottom_atol Kynema-SGF input parameter diffusion.bottom_maxiter Kynema-SGF input parameter diffusion.bottom_rtol Kynema-SGF input parameter diffusion.bottom_solver Kynema-SGF input parameter diffusion.bottom_verbose Kynema-SGF input parameter diffusion.do_fixed_iters Kynema-SGF input parameter diffusion.fmg_maxiter Kynema-SGF input parameter diffusion.hypre_interface Kynema-SGF input parameter diffusion.hypre_namespace Kynema-SGF input parameter diffusion.max_coarsening_level Kynema-SGF input parameter diffusion.max_order Kynema-SGF input parameter diffusion.maxiter Kynema-SGF input parameter diffusion.mg_atol Kynema-SGF input parameter diffusion.mg_rtol Kynema-SGF input parameter diffusion.num_bottom_smooth Kynema-SGF input parameter diffusion.num_final_smooth Kynema-SGF input parameter diffusion.num_post_smooth Kynema-SGF input parameter diffusion.num_pre_smooth Kynema-SGF input parameter

diffusion.verbose Kynema-SGF input parameter DragForcing.bc_forcing_time_factor Kynema-SGF input parameter DragForcing.drag_coefficient Kynema-SGF input parameter DragForcing.is_laminar Kynema-SGF input parameter DragForcing.sponge_density Kynema-SGF input parameter DragForcing.sponge_distance_east Kynema-SGF input parameter DragForcing.sponge_distance_north Kynema-SGF input parameter DragForcing.sponge_distance_south Kynema-SGF input parameter DragForcing.sponge_distance_west Kynema-SGF input parameter DragForcing.sponge_east Kynema-SGF input parameter DragForcing.sponge_north Kynema-SGF input parameter DragForcing.sponge_south Kynema-SGF input parameter DragForcing.sponge_strength Kynema-SGF input parameter DragForcing.sponge_west Kynema-SGF input parameter DragForcing.wave_model_inviscid_form_drag Kynema-SGF input parameter DragTempForcing.bc_forcing_time_factor Kynema-SGF input parameter DragTempForcing.drag_coefficient Kynema-SGF input parameter

E

enst.output_interval Kynema-SGF input parameter enst.type Kynema-SGF input parameter

example_plotfile_io.py Kynema-SGF input parameter

F

fcompare_particles.py Kynema-SGF input parameter fieldnorms.mask_redundant_grids Kynema-SGF input parameter fieldnorms.norm_type Kynema-SGF input parameter

fieldnorms.type Kynema-SGF input parameter fieldnorms.use_vector_magnitude Kynema-SGF input parameter

G

generate_native_boundary_plane.py Kynema-SGF input parameter generate_native_boundary_plane_header.py Kynema-SGF input parameter geometry.is_periodic Kynema-SGF input parameter geometry.mesh_mapping Kynema-SGF input parameter geometry.prob_hi Kynema-SGF input parameter

geometry.prob_hi_physical Kynema-SGF input parameter geometry.prob_lo Kynema-SGF input parameter GeostrophicForcing.geostrophic_wind Kynema-SGF input parameter GeostrophicForcing.geostrophic_wind_timetable Kynema-SGF input parameter

I

ICNS.reconstruct_true_pressure Kynema-SGF input parameter ICNS.source_terms Kynema-SGF input parameter ICNS.use_perturb_pressure Kynema-SGF input parameter incflo.constant_density Kynema-SGF input parameter incflo.density Kynema-SGF input parameter incflo.diffusion_type Kynema-SGF input parameter incflo.do_initial_proj Kynema-SGF input parameter incflo.dry_run Kynema-SGF input parameter incflo.godunov_type Kynema-SGF input parameter incflo.godunov_use_forces_in_trans Kynema-SGF input parameter incflo.gravity Kynema-SGF input parameter incflo.initial_iterations Kynema-SGF input parameter incflo.physics Kynema-SGF input parameter incflo.post_processing Kynema-SGF input parameter incflo.use_godunov Kynema-SGF input parameter

incflo.velocity Kynema-SGF input parameter incflo.verbose Kynema-SGF input parameter io.allow_missing_restart_fields Kynema-SGF input parameter io.check_file Kynema-SGF input parameter io.derived_outputs Kynema-SGF input parameter io.hdf5_compression Kynema-SGF input parameter io.int_outputs Kynema-SGF input parameter io.nfiles Kynema-SGF input parameter io.output_default_variables Kynema-SGF input parameter io.output_hdf5_plotfile Kynema-SGF input parameter io.outputs Kynema-SGF input parameter io.plot_file Kynema-SGF input parameter io.post_processing_directory Kynema-SGF input parameter io.restart_file Kynema-SGF input parameter io.skip_outputs Kynema-SGF input parameter

K

ke.output_interval Kynema-SGF input parameter ke.type Kynema-SGF input parameter Kynema-SGF input parameter **type:** Real, required, default = 0.05 **type:** Real, required, default = 0.8 **type:** Real, required, default = 4 ABL.aerodynamic_roughness_length ABL.anelastic ABL.bndry_file ABL.bndry_io_mode ABL.bndry_output_format ABL.bndry_output_start_time ABL.bndry_planes ABL.bndry_var_names ABL.bottom_reference_pressure ABL.cutoff_height ABL.deltaU ABL.deltaV ABL.initial_condition_input_file ABL.initial_wind_profile ABL.kappa ABL.log_law_height ABL.meso_sponge_start ABL.mesoscale_forcing ABL.minimum_vertical_position ABL.monin_obukhov_length ABL.normal_direction ABL.pertub_ref_height ABL.perturb_temperature ABL.perturb_velocity ABL.random_gauss_mean ABL.random_gauss_var ABL.rans_1dprofile_file ABL.surface_roughness_z0 ABL.surface_temp_flux ABL.surface_temp_init ABL.surface_temp_rate ABL.surface_temp_rate_tstart ABL.surface_temp_timetable ABL.temp_sponge_start ABL.temperature_heights ABL.temperature_values ABL.tendency_forcing ABL.terrain_aligned_profile ABL.thermal_roughness_length ABL.theta_amplitude ABL.Uperiods ABL.velocity_sponge_start ABL.Vperiods ABL.wall_het_model ABL.wall_shear_stress_type ABLForcing.abl_forcing_band ABLForcing.abl_forcing_height ABLForcing.abl_forcing_off_height ABLForcing.abl_forcing_ramp_height ABLForcing.forcing_timetable_frequency ABLForcing.forcing_timetable_output_file ABLForcing.forcing_timetable_start_time ABLForcing.velocity_timetable ABLMesoForcing*.constant_transition_height ABLMesoForcing*.control_gain ABLMesoForcing*.forcing_scheme ABLMesoForcing*.forcing_transition ABLMesoForcing*.normalize_by_zmax ABLMesoForcing*.transition_thickness ABLMesoForcing*.weighting_heights ABLMesoForcing*.weighting_values Actuator.F1.end Actuator.F1.output_frequency Actuator.F1.start Actuator.FixedWingLine.active_force_dirs Actuator.FixedWingLine.airfoil_table Actuator.FixedWingLine.airfoil_type Actuator.FixedWingLine.chord Actuator.FixedWingLine.disable_spanwise_gaussian Actuator.FixedWingLine.epsilon Actuator.FixedWingLine.epsilon_chord Actuator.FixedWingLine.fllc Actuator.FixedWingLine.fllc_epsilon_dr_ratio Actuator.FixedWingLine.fllc_nonuniform Actuator.FixedWingLine.fllc_relaxation_factor Actuator.FixedWingLine.fllc_start_time Actuator.FixedWingLine.fllc_type Actuator.FixedWingLine.motion_type Actuator.FixedWingLine.normalize_spanwise Actuator.FixedWingLine.num_points Actuator.FixedWingLine.pitch Actuator.FixedWingLine.pitch_timetable Actuator.FixedWingLine.prescribed_uinf Actuator.FixedWingLine.sine_period Actuator.FixedWingLine.sine_vector Actuator.FixedWingLine.span_locs Actuator.FixedWingLine.velocity Actuator.labels Actuator.TurbineFastLine.density Actuator.TurbineFastLine.epsilon Actuator.TurbineFastLine.epsilon_chord Actuator.TurbineFastLine.fllc Actuator.TurbineFastLine.fllc_relaxation_factor Actuator.TurbineFastLine.fllc_type Actuator.TurbineFastLine.hub_height Actuator.TurbineFastLine.nacelle_area Actuator.TurbineFastLine.nacelle_drag_coeff Actuator.TurbineFastLine.num_points_blade Actuator.TurbineFastLine.num_points_tower Actuator.TurbineFastLine.openfast_start_time Actuator.TurbineFastLine.openfast_stop_time Actuator.TurbineFastLine.output_frequency Actuator.TurbineFastLine.rotor_diameter Actuator.TurbineKynemaLine.controller_shared_library_path Actuator.TurbineKynemaLine.dt Actuator.TurbineKynemaLine.generator_efficiency Actuator.TurbineKynemaLine.generator_power_init Actuator.TurbineKynemaLine.hub_wind_vector_init Actuator.TurbineKynemaLine.kynema_input_file Actuator.TurbineKynemaLine.num_points_blade Actuator.TurbineKynemaLine.num_points_tower Actuator.TurbineKynemaLine.num_struct_nodes_blade Actuator.TurbineKynemaLine.num_struct_nodes_tower Actuator.TurbineKynemaLine.output_frequency Actuator.TurbineKynemaLine.rot_speed_radps Actuator.TurbineKynemaLine.rot_speed_rpm Actuator.TurbineKynemaLine.yaw_deg Actuator.TurbineKynemaLine.yaw_rad Actuator.type Actuator.WTG01.awc_amplitude Actuator.WTG01.awc_angular_frequency Actuator.WTG01.awc_azimuthal_mode Actuator.WTG01.awc_clocking_angle Actuator.WTG01.openfast_input_file ActuatorSourceTagging.actuator_source_threshold amr.blocking_factor amr.max_grid_size amr.max_level amr.n_cell amrex_particle.py amrex_plotfile.py amrex_utils.py averaging.averaging_start_time averaging.averaging_stop_time averaging.averaging_time_interval averaging.averaging_window BodyForce.angular_frequency BodyForce.bodyforce_file BodyForce.magnitude BodyForce.type BodyForce.uniform_timetable_file calc_inflowoutflow_stats.py CheckpointToCSV coarsen-chkpt compareMultilevelToReference convert_amrex_hdf5_plotfile.py convert_native_sample_to_time_series.py convert_native_sampling_to_structured_ascii.py CoriolisForcing.east_vector CoriolisForcing.latitude CoriolisForcing.north_vector CoriolisForcing.rotational_time_period diffusion.bottom_atol diffusion.bottom_maxiter diffusion.bottom_rtol diffusion.bottom_solver diffusion.bottom_verbose diffusion.do_fixed_iters diffusion.fmg_maxiter diffusion.hypre_interface diffusion.hypre_namespace diffusion.max_coarsening_level diffusion.max_order diffusion.maxiter diffusion.mg_atol diffusion.mg_rtol diffusion.num_bottom_smooth diffusion.num_final_smooth diffusion.num_post_smooth diffusion.num_pre_smooth diffusion.verbose DragForcing.bc_forcing_time_factor DragForcing.drag_coefficient DragForcing.is_laminar DragForcing.sponge_density DragForcing.sponge_distance_east DragForcing.sponge_distance_north DragForcing.sponge_distance_south DragForcing.sponge_distance_west DragForcing.sponge_east DragForcing.sponge_north DragForcing.sponge_south DragForcing.sponge_strength DragForcing.sponge_west DragForcing.wave_model_inviscid_form_drag DragTempForcing.bc_forcing_time_factor DragTempForcing.drag_coefficient enst.output_interval enst.type example_plotfile_io.py fcompare_particles.py fieldnorms.mask_redundant_grids fieldnorms.norm_type fieldnorms.type fieldnorms.use_vector_magnitude generate_native_boundary_plane.py generate_native_boundary_plane_header.py geometry.is_periodic geometry.mesh_mapping geometry.prob_hi geometry.prob_hi_physical geometry.prob_lo GeostrophicForcing.geostrophic_wind GeostrophicForcing.geostrophic_wind_timetable ICNS.reconstruct_true_pressure ICNS.source_terms ICNS.use_perturb_pressure incflo.constant_density incflo.density incflo.diffusion_type incflo.do_initial_proj incflo.dry_run incflo.godunov_type incflo.godunov_use_forces_in_trans incflo.gravity incflo.initial_iterations incflo.physics incflo.post_processing incflo.use_godunov incflo.velocity incflo.verbose io.allow_missing_restart_fields io.check_file io.derived_outputs io.hdf5_compression io.int_outputs io.nfiles io.output_default_variables io.output_hdf5_plotfile io.outputs io.plot_file io.post_processing_directory io.restart_file io.skip_outputs ke.output_interval ke.type Kynema.abs_err_tol Kynema.damping_factor Kynema.max_nonlinear_iterations Kynema.rel_err_tol LinearProfile.<field_name>.direction LinearProfile.<field_name>.start LinearProfile.<field_name>.start_val LinearProfile.<field_name>.stop LinearProfile.<field_name>.stop_val modify_hdf5_attributes.py MultiPhase.density_fluid1 MultiPhase.density_fluid2 MultiPhase.verbose MultiPhase.water_level native_boundary_plane.py OceanWaves.label OceanWaves.label.current OceanWaves.label.fftw_planner_flag OceanWaves.label.HOS_domain_offset_x OceanWaves.label.HOS_domain_offset_y OceanWaves.label.HOS_init_time OceanWaves.label.HOS_init_timestep OceanWaves.label.HOS_modes_filename OceanWaves.label.HOS_simulation_is_ocean OceanWaves.label.initialize_wave_field OceanWaves.label.interp_spacing_at_surface OceanWaves.label.number_interp_above_surface OceanWaves.label.number_interp_points_in_z OceanWaves.label.numerical_beach_length OceanWaves.label.numerical_beach_length_factor OceanWaves.label.order OceanWaves.label.relax_zone_gen_length OceanWaves.label.relax_zone_out_length OceanWaves.label.stokes_wavelength_iter_max OceanWaves.label.stokes_wavelength_order OceanWaves.label.stokes_wavelength_tolerance OceanWaves.label.timeramp_period OceanWaves.label.type OceanWaves.label.water_depth OceanWaves.label.wave_height OceanWaves.label.wave_length OceanWaves.label.wave_period OceanWaves.label.wave_phase_offset_degrees OceanWaves.label.wave_phase_offset_radians OceanWaves.label.zero_sea_level PerturbationForcing.end PerturbationForcing.pert_amplitude PerturbationForcing.start PerturbationForcing.time_steps PlotfileToCSV postproc.enforce_output_time_dt postproc.enforce_output_time_dt_reltol postproc.output_after_final_step postproc.output_delay postproc.output_from_restart postproc.output_interval postproc.output_start postproc.output_start_time postproc.output_time_delay postproc.output_time_interval postproc.type PowerLawProfile.direction PowerLawProfile.shear_exponent PowerLawProfile.umax PowerLawProfile.umin PowerLawProfile.uref PowerLawProfile.zoffset PowerLawProfile.zref Rankine.Rmax Rankine.start_location Rankine.Umax refine-chkpt refine_native_boundary_plane.py sampling.derived_fields sampling.fields sampling.int_fields sampling.labels sampling.output_format sampling_dam_break_godunov_ascii.py sampling_dam_break_godunov_native.py sampling_dam_break_godunov_netcdf.py Smagorinsky_coeffs.Cs subvol1.chunk1.chunk_size_vec subvol1.chunk1.dx subvol1.chunk1.dx_vec subvol1.chunk1.num_points subvol1.chunk1.origin subvol1.chunk1.type subvol1.derived_fields subvol1.fields subvol1.int_fields subvol1.labels subvol1.output_rename subvol1.type SynthTurb.gauss_smearing_factor SynthTurb.grid_location SynthTurb.mean_wind_type SynthTurb.shear_exponent SynthTurb.time_offset SynthTurb.turbulence_file SynthTurb.umax SynthTurb.umin SynthTurb.uref SynthTurb.wind_direction SynthTurb.zoffset SynthTurb.zref tagging.CartBoxRefinement.static_refinement_def tagging.FieldRefinement.box_hi tagging.FieldRefinement.box_lo tagging.FieldRefinement.field_error tagging.FieldRefinement.field_name tagging.FieldRefinement.grad_error tagging.GeoemtryRefinement.level tagging.GeometryRefinement.max_level tagging.GeometryRefinement.min_level tagging.GeometryRefinement.shapes tagging.GeometryRefinement.UDFRefiner.box_hi tagging.GeometryRefinement.UDFRefiner.box_lo tagging.GeometryRefinement.UDFRefiner.udf tagging.labels tagging.QCriterionRefinement.nondim tagging.QCriterionRefinement.values tagging.static_refinement tagging.static_refinement_def temperature.source_terms time.cfl time.checkpoint_delay time.checkpoint_interval time.checkpoint_start time.checkpoint_time_delay time.checkpoint_time_interval time.checkpoint_time_interval_reltol time.enforce_checkpoint_dt_reltol time.enforce_checkpoint_time_dt time.enforce_plot_dt_reltol time.enforce_plot_time_dt time.fixed_dt time.init_shrink time.initial_dt time.max_dt time.max_dt_growth time.max_step time.min_dt time.plot_delay time.plot_interval time.plot_start time.plot_time_delay time.plot_time_interval time.plot_time_interval_reltol time.profiling_interval time.regrid_interval time.regrid_start time.stop_time time.use_force_cfl TKE.source_terms transport.laminar_prandtl transport.model transport.reference_temperature transport.thermal_expansion_coefficient transport.turbulent_prandtl transport.viscosity turbulence.model TwoLayer.bottom_vel TwoLayer.init_perturb TwoLayer.top_vel TwoLayer.z_partition wave_mosd.amplitude wave_mosd.frequency wave_mosd.wavenumber xlo.temperature (or ylo.temperature, etc) xlo.type (or ylo.type, zlo.type, xhi.type, yhi.type, zhi.type)

Kynema.abs_err_tol Kynema-SGF input parameter Kynema.damping_factor Kynema-SGF input parameter Kynema.max_nonlinear_iterations Kynema-SGF input parameter Kynema.rel_err_tol Kynema-SGF input parameter KYNEMA_SGF_ENABLE_CUDA CMake configuration KYNEMA_SGF_ENABLE_DOCUMENTATION CMake configuration KYNEMA_SGF_ENABLE_MASA CMake configuration KYNEMA_SGF_ENABLE_MPI CMake configuration KYNEMA_SGF_ENABLE_NETCDF CMake configuration KYNEMA_SGF_ENABLE_OPENFAST CMake configuration KYNEMA_SGF_ENABLE_OPENMP CMake configuration KYNEMA_SGF_ENABLE_ROCM CMake configuration KYNEMA_SGF_ENABLE_SYCL CMake configuration KYNEMA_SGF_ENABLE_TESTS CMake configuration KYNEMA_SGF_OPENFAST_VERSION CMake configuration KYNEMA_SGF_REFERENCE_GOLDS_DIRECTORY CMake configuration KYNEMA_SGF_SAVE_GOLDS CMake configuration KYNEMA_SGF_SAVED_GOLDS_DIRECTORY CMake configuration KYNEMA_SGF_TEST_WITH_FCOMPARE CMake configuration KYNEMA_SGF_TEST_WITH_PYTHON CMake configuration kynema_sgf_tests::AmrexTest (C++ class) kynema_sgf_tests::AmrexTestEnv (C++ class) kynema_sgf_tests::AmrTestMesh (C++ class) kynema_sgf_tests::default_mesh_inputs (C++ function) kynema_sgf_tests::default_time_inputs (C++ function) kynema_sgf_tests::MeshTest (C++ class) kynema_sgf_tests::MeshTest::create_mesh_instance (C++ function) kynema_sgf_tests::MeshTest::initialize_mesh (C++ function) kynema_sgf_tests::MeshTest::populate_parameters (C++ function)

L

LinearProfile.<field_name>.direction Kynema-SGF input parameter LinearProfile.<field_name>.start Kynema-SGF input parameter LinearProfile.<field_name>.start_val Kynema-SGF input parameter

LinearProfile.<field_name>.stop Kynema-SGF input parameter LinearProfile.<field_name>.stop_val Kynema-SGF input parameter

M

modify_hdf5_attributes.py Kynema-SGF input parameter MultiPhase.density_fluid1 Kynema-SGF input parameter MultiPhase.density_fluid2 Kynema-SGF input parameter

MultiPhase.verbose Kynema-SGF input parameter MultiPhase.water_level Kynema-SGF input parameter

N

native_boundary_plane.py Kynema-SGF input parameter

O

OceanWaves.label Kynema-SGF input parameter OceanWaves.label.current Kynema-SGF input parameter OceanWaves.label.fftw_planner_flag Kynema-SGF input parameter OceanWaves.label.HOS_domain_offset_x Kynema-SGF input parameter OceanWaves.label.HOS_domain_offset_y Kynema-SGF input parameter OceanWaves.label.HOS_init_time Kynema-SGF input parameter OceanWaves.label.HOS_init_timestep Kynema-SGF input parameter OceanWaves.label.HOS_modes_filename Kynema-SGF input parameter OceanWaves.label.HOS_simulation_is_ocean Kynema-SGF input parameter OceanWaves.label.initialize_wave_field Kynema-SGF input parameter OceanWaves.label.interp_spacing_at_surface Kynema-SGF input parameter OceanWaves.label.number_interp_above_surface Kynema-SGF input parameter OceanWaves.label.number_interp_points_in_z Kynema-SGF input parameter OceanWaves.label.numerical_beach_length Kynema-SGF input parameter OceanWaves.label.numerical_beach_length_factor Kynema-SGF input parameter

OceanWaves.label.order Kynema-SGF input parameter OceanWaves.label.relax_zone_gen_length Kynema-SGF input parameter OceanWaves.label.relax_zone_out_length Kynema-SGF input parameter OceanWaves.label.stokes_wavelength_iter_max Kynema-SGF input parameter OceanWaves.label.stokes_wavelength_order Kynema-SGF input parameter OceanWaves.label.stokes_wavelength_tolerance Kynema-SGF input parameter OceanWaves.label.timeramp_period Kynema-SGF input parameter OceanWaves.label.type Kynema-SGF input parameter OceanWaves.label.water_depth Kynema-SGF input parameter OceanWaves.label.wave_height Kynema-SGF input parameter OceanWaves.label.wave_length Kynema-SGF input parameter OceanWaves.label.wave_period Kynema-SGF input parameter OceanWaves.label.wave_phase_offset_degrees Kynema-SGF input parameter OceanWaves.label.wave_phase_offset_radians Kynema-SGF input parameter OceanWaves.label.zero_sea_level Kynema-SGF input parameter

P

PerturbationForcing.end Kynema-SGF input parameter PerturbationForcing.pert_amplitude Kynema-SGF input parameter PerturbationForcing.start Kynema-SGF input parameter PerturbationForcing.time_steps Kynema-SGF input parameter PlotfileToCSV Kynema-SGF input parameter postproc.enforce_output_time_dt Kynema-SGF input parameter postproc.enforce_output_time_dt_reltol Kynema-SGF input parameter postproc.output_after_final_step Kynema-SGF input parameter postproc.output_delay Kynema-SGF input parameter postproc.output_from_restart Kynema-SGF input parameter postproc.output_interval Kynema-SGF input parameter postproc.output_start Kynema-SGF input parameter

postproc.output_start_time Kynema-SGF input parameter postproc.output_time_delay Kynema-SGF input parameter postproc.output_time_interval Kynema-SGF input parameter postproc.type Kynema-SGF input parameter PowerLawProfile.direction Kynema-SGF input parameter PowerLawProfile.shear_exponent Kynema-SGF input parameter PowerLawProfile.umax Kynema-SGF input parameter PowerLawProfile.umin Kynema-SGF input parameter PowerLawProfile.uref Kynema-SGF input parameter PowerLawProfile.zoffset Kynema-SGF input parameter PowerLawProfile.zref Kynema-SGF input parameter

R

Rankine.Rmax Kynema-SGF input parameter Rankine.start_location Kynema-SGF input parameter Rankine.Umax Kynema-SGF input parameter

refine-chkpt Kynema-SGF input parameter refine_native_boundary_plane.py Kynema-SGF input parameter

S

sampling.derived_fields Kynema-SGF input parameter sampling.fields Kynema-SGF input parameter sampling.int_fields Kynema-SGF input parameter sampling.labels Kynema-SGF input parameter sampling.output_format Kynema-SGF input parameter sampling_dam_break_godunov_ascii.py Kynema-SGF input parameter sampling_dam_break_godunov_native.py Kynema-SGF input parameter sampling_dam_break_godunov_netcdf.py Kynema-SGF input parameter Smagorinsky_coeffs.Cs Kynema-SGF input parameter subvol1.chunk1.chunk_size_vec Kynema-SGF input parameter subvol1.chunk1.dx Kynema-SGF input parameter subvol1.chunk1.dx_vec Kynema-SGF input parameter subvol1.chunk1.num_points Kynema-SGF input parameter subvol1.chunk1.origin Kynema-SGF input parameter subvol1.chunk1.type Kynema-SGF input parameter subvol1.derived_fields Kynema-SGF input parameter subvol1.fields Kynema-SGF input parameter

subvol1.int_fields Kynema-SGF input parameter subvol1.labels Kynema-SGF input parameter subvol1.output_rename Kynema-SGF input parameter subvol1.type Kynema-SGF input parameter SynthTurb.gauss_smearing_factor Kynema-SGF input parameter SynthTurb.grid_location Kynema-SGF input parameter SynthTurb.mean_wind_type Kynema-SGF input parameter SynthTurb.shear_exponent Kynema-SGF input parameter SynthTurb.time_offset Kynema-SGF input parameter SynthTurb.turbulence_file Kynema-SGF input parameter SynthTurb.umax Kynema-SGF input parameter SynthTurb.umin Kynema-SGF input parameter SynthTurb.uref Kynema-SGF input parameter SynthTurb.wind_direction Kynema-SGF input parameter SynthTurb.zoffset Kynema-SGF input parameter SynthTurb.zref Kynema-SGF input parameter

T

tagging.CartBoxRefinement.static_refinement_def Kynema-SGF input parameter tagging.FieldRefinement.box_hi Kynema-SGF input parameter tagging.FieldRefinement.box_lo Kynema-SGF input parameter tagging.FieldRefinement.field_error Kynema-SGF input parameter tagging.FieldRefinement.field_name Kynema-SGF input parameter tagging.FieldRefinement.grad_error Kynema-SGF input parameter tagging.GeoemtryRefinement.level Kynema-SGF input parameter tagging.GeometryRefinement.max_level Kynema-SGF input parameter tagging.GeometryRefinement.min_level Kynema-SGF input parameter tagging.GeometryRefinement.shapes Kynema-SGF input parameter tagging.GeometryRefinement.UDFRefiner.box_hi Kynema-SGF input parameter tagging.GeometryRefinement.UDFRefiner.box_lo Kynema-SGF input parameter tagging.GeometryRefinement.UDFRefiner.udf Kynema-SGF input parameter tagging.labels Kynema-SGF input parameter tagging.QCriterionRefinement.nondim Kynema-SGF input parameter tagging.QCriterionRefinement.values Kynema-SGF input parameter tagging.static_refinement Kynema-SGF input parameter tagging.static_refinement_def Kynema-SGF input parameter temperature.source_terms Kynema-SGF input parameter time.cfl Kynema-SGF input parameter time.checkpoint_delay Kynema-SGF input parameter time.checkpoint_interval Kynema-SGF input parameter time.checkpoint_start Kynema-SGF input parameter time.checkpoint_time_delay Kynema-SGF input parameter time.checkpoint_time_interval Kynema-SGF input parameter time.checkpoint_time_interval_reltol Kynema-SGF input parameter time.enforce_checkpoint_dt_reltol Kynema-SGF input parameter time.enforce_checkpoint_time_dt Kynema-SGF input parameter time.enforce_plot_dt_reltol Kynema-SGF input parameter time.enforce_plot_time_dt Kynema-SGF input parameter

time.fixed_dt Kynema-SGF input parameter time.init_shrink Kynema-SGF input parameter time.initial_dt Kynema-SGF input parameter time.max_dt Kynema-SGF input parameter time.max_dt_growth Kynema-SGF input parameter time.max_step Kynema-SGF input parameter time.min_dt Kynema-SGF input parameter time.plot_delay Kynema-SGF input parameter time.plot_interval Kynema-SGF input parameter time.plot_start Kynema-SGF input parameter time.plot_time_delay Kynema-SGF input parameter time.plot_time_interval Kynema-SGF input parameter time.plot_time_interval_reltol Kynema-SGF input parameter time.profiling_interval Kynema-SGF input parameter time.regrid_interval Kynema-SGF input parameter time.regrid_start Kynema-SGF input parameter time.stop_time Kynema-SGF input parameter time.use_force_cfl Kynema-SGF input parameter TKE.source_terms Kynema-SGF input parameter transport.laminar_prandtl Kynema-SGF input parameter transport.model Kynema-SGF input parameter transport.reference_temperature Kynema-SGF input parameter transport.thermal_expansion_coefficient Kynema-SGF input parameter transport.turbulent_prandtl Kynema-SGF input parameter transport.viscosity Kynema-SGF input parameter turbulence.model Kynema-SGF input parameter TwoLayer.bottom_vel Kynema-SGF input parameter TwoLayer.init_perturb Kynema-SGF input parameter TwoLayer.top_vel Kynema-SGF input parameter TwoLayer.z_partition Kynema-SGF input parameter

W

wave_mosd.amplitude Kynema-SGF input parameter wave_mosd.frequency Kynema-SGF input parameter

wave_mosd.wavenumber Kynema-SGF input parameter

X

xlo.temperature (or ylo.temperature, etc) Kynema-SGF input parameter

xlo.type (or ylo.type, zlo.type, xhi.type, yhi.type, zhi.type) Kynema-SGF input parameter